BioJava 5: A community driven open-source bioinformatics library

Publishing date: 2019-02-27

Published on: PLOS Computational Biology

summary: Channel Editor Summary: BioJava is an open source project which provides a Java framework for processing biological data. The project offers analytical and statistical routines, parsers for common file formats, reference implementations of popular algorithms, and allows the manipulation of sequences and 3D structures. BioJava is a very high quality project that has been maintained since 2000 and has created a large and growing community for itself. It currently has 59 contributors and over 200 starts on its Github repository.

authors: Aleix Lafita, Spencer Bliven, Andreas Prlić, Dmytro Guzenko, Peter W. Rose, Anthony Bradley, Paolo Pavan, Douglas Myers-Turnbull, Yana Valasatava, Michael Heuer, Matt Larson, Stephen K. Burley, Jose M. Duarte

link to paper: 10.1371/journal.pcbi.1006791

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