BMC Bioinformatics

Multi-template matching: a versatile tool for object-localization in microscopy images

Publishing date: 2020-03-03 Published on: BMC Bioinformatics summary: The localization of objects of interest is a key initial step in most image analysis workflows. For biomedical image data, classical image-segmentation methods like thresholding or edge detection are typically used.

PANEV: an R package for a pathway-based network visualization

Publishing date: 2020-03-03 Published on: BMC Bioinformatics summary: None authors: Valentino Palombo, Marco Milanesi, Gabriella Sferra, Stefano Capomaccio, Sandy Sgorlon & Mariasilvia D’Andrea link to paper: https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-020-3371-7 Icons made by catkuro from www.

EvoFreq: visualization of the Evolutionary Frequencies of sequence and model data

Publishing date: 2020-01-15 Published on: BMC Bioinformatics summary: This software article presents “https://github.com/MathOnco/EvoFreq">EvoFreq<, a comprehensive tool to visualise the evolutionary and population frequency dynamics of clones at a single point in time or as population frequencies over time using a variety of informative methods.

Gencore: an efficient tool to generate consensus reads for error suppressing and duplicate removing of NGS data

Publishing date: 2020-01-15 Published on: BMC Bioinformatics summary: None authors: Shifu Chen, Yanqing Zhou, Yaru Chen, Tanxiao Huang, Wenting Liao, Yun Xu, Zhicheng Li & Jia Gu link to paper: https://bmcbioinformatics.