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“My life after stroke through a camera lens”- A photovoice study on participation in Sweden

Publishing date: 2019-10-17 Published on: PLOS ONE summary: An increasing number of people with stroke live in their communities, yet the understanding of how their reintegration into society can best be facilitated is incomplete.

New methods of removing debris and high-throughput counting of cyst nematode eggs extracted from field soil

Publishing date: 2019-10-15 Published on: PLOS ONE summary: None authors: Upender Kalwa, Christopher Legner, Elizabeth Wlezien, Gregory Tylka, Santosh Pandey link to paper: 10.1371/journal.pone.0223386 Icons made by catkuro from www.flaticon.com

Nessys: A new set of tools for the automated detection of nuclei within intact tissues and dense 3D cultures

Publishing date: 2019-09-26 Published on: PLOS Biology summary: Methods for measuring the properties of individual cells within their native 3D environment will enable a deeper understanding of embryonic development, tissue regeneration, and tumorigenesis.

Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits

Publishing date: 2019-09-26 Published on: Neuron summary: Computational models are powerful tools for exploring the properties of complex biological systems. In neuroscience, data-driven models of neural circuits that span multiple scales are increasingly being used to understand brain function in health and disease.

Open Source Tools and Methods

Publishing date: 2019-09-26 Published on: eNeuro summary: eNeuro announce a new type of paper to provide a venue to share open-source tools and methods. Introducing this new type of papers offers several advantages: reducing the time and money laboratories spend to reinvent methods; increasing transparency; and improving reproducibility.

Ten simple rules for helping newcomers become contributors to open projects

Publishing date: 2019-09-26 Published on: PLOS Computational Biology summary: Open source projects are nothing but a collaborative effort of community members. The constant involvement of maintainers, contributors, and users make open source software sustainable and keeps the community as a whole going.

uORF-Tools – Workflow for the determination of translation-regulatory upstream open reading frames

Publishing date: 2019-09-26 Published on: PLOS ONE summary: Ribosome profiling (ribo-seq) provides a means to analyze active translation by determining ribosome occupancy in a transcriptome-wide manner. The vast majority of ribosome protected fragments (RPFs) resides within the protein-coding sequence of mRNAs.

Comparing record linkage software programs and algorithms using real-world data

Publishing date: 2019-09-24 Published on: PLOS ONE summary: None authors: Alan F. Karr, Matthew T. Taylor, Suzanne L. West, Soko Setoguchi, Tzuyung D. Kou, Tobias Gerhard, Daniel B. Horton link to paper: 10.

A 3D Printed Device for Low Cost Neural Stimulation in Mice

Publishing date: 2019-09-05 Published on: Frontiers Neuroscience summary: None authors: Taylor J. Morrison, Elana Sefton, Melissa Marquez-Chin, Milos R. Popovic, Cindi M. Morshead and Hani E. Naguib link to paper: https://www.

AMi: a GUI-based, open-source system for imaging samples in multi-well plates

Publishing date: 2019-09-05 Published on: Methods Communications summary: None authors: A. Bohm link to paper: http://scripts.iucr.org/cgi-bin/paper?S2053230X19009853 Icons made by catkuro from www.flaticon.com