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PlasPI marine cameras: Open-source, affordable camera systems for time series marine studies

Publishing date: 2020-04-03 Published on: Hardware X summary: None authors: Autun Purser, Ulrich Hoge, Johannes Lemburg, Yasemin Bodur, Elena Schiller, Janine Ludszuweit, Jens Greinert, Frank Wenzhöfer link to paper: https://doi.org/10.1016/j.ohx.2020.e00102

RPG: A low-cost, open-source, high-performance solution for displaying visual stimuli

Publishing date: 2020-04-03 Published on: bioRxiv summary: None authors: Vivian Imbriotis, Adam Ranson, William M Connelly link to paper: https://doi.org/10.1101/2020.03.05.979724 Icons made by catkuro from www.flaticon.com

SAFE Acoustics: an open-source, real-time eco-acoustic monitoring network in the tropical rainforests of Borneo

Publishing date: 2020-04-03 Published on: bioRxiv summary: None authors: Sarab S. Sethi, Robert M. Ewers, Nick S. Jones, Aaron Signorelli, Lorenzo Picinali, C. David L. Orme link to paper: https://doi.org/10.1101/2020.02.27.968867

Ten simple rules for providing effective bioinformatics research support

Publishing date: 2020-03-26 Published on: PLOS Computational Biology summary: None authors: Judit Kumuthini, Michael Chimenti, Sven Nahnsen, Alexander Peltzer, Rebone Meraba, Ross McFadyen, Gordon Wells, Deanne Taylor, Mark Maienschein-Cline, Jian-Liang Li, Jyothi Thimmapuram, Radha Murthy-Karuturi, Lyndon Zass

Multiple social platforms reveal actionable signals for software vulnerability awareness: A study of GitHub, Twitter and Reddit

Publishing date: 2020-03-24 Published on: PLOS ONE summary: None authors: Prasha Shrestha, Arun Sathanur, Suraj Maharjan, Emily Saldanha, Dustin Arendt, Svitlana Volkova link to paper: 10.1371/journal.pone.0230250 Icons made by catkuro from www.

A portable, low-cost device for precise control of specimen temperature under stereomicroscopes

Publishing date: 2020-03-11 Published on: PLOS ONE summary: None authors: Nicholas D. Testa, Samiksha Kaul, Kim N. Le, Mei Zhan, Hang Lu, Annalise B. Paaby link to paper: 10.1371/journal.pone.0230241 Icons made by catkuro from www.

BornAgain: software for simulating and fitting grazing-incidence small-angle scattering

Publishing date: 2020-03-03 Published on: Journal of Applied Crystallography summary: BornAgain is a free and open-source multi-platform software framework for simulating and fitting X-ray and neutron reflectometry, off-specular scattering, and grazing-incidence small-angle scattering (GISAS).

Compressive Big Data Analytics: An Ensemble Meta-Algorithm for High-dimensional Multisource Datasets

Publishing date: 2020-03-03 Published on: bioRxiv summary: None authors: Simeone Marino, Yi Zhao, Nina Zhou, Yiwang Zhou, Arthur Toga, Lu Zhao, Yingsi Jian, Yichen Yang, Yehu Chen, Qiucheng Wu, Jessica Wild, Brandon Cummings, Ivo D.

HAMAP as SPARQL rules—A portable annotation pipeline for genomes and proteomes

Publishing date: 2020-03-03 Published on: GigaScience summary: Genome and proteome annotation pipelines are generally custom built and not easily reusable by other groups. This leads to duplication of effort, increased costs, and suboptimal annotation quality.

Metrics for graph comparison: A practitioner’s guide

Publishing date: 2020-03-03 Published on: PLOS ONE summary: Comparison of graph structure is a ubiquitous task in data analysis and machine learning, with diverse applications in fields such as neuroscience, cyber security, social network analysis, and bioinformatics.