Publishing date: 2018-09-06
Published on: PLOS ONE
summary: None
authors: Pascal T. Merz, Michael R. Shirts
link to paper: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0202764
Icons made by catkuro from www.flaticon.com
Publishing date: 2018-08-17
Published on: PLOS Computational Biology
summary: Garrido-Martín et al. present ggsashimi, a command-line tool for the visualization of splicing events across multiple samples. Given a specified genomic region, ggsashimi creates sashimi plots for individual RNA-seq experiments as well as aggregated plots for groups of experiments, a feature unique to this software.
Publishing date: 2018-08-13
Published on: PLOS Computational Biology
summary: None
authors: None
link to paper: http://dx.doi.org/10.1371/journal.pcbi.1006169
Icons made by catkuro from www.flaticon.com
Publishing date: 2018-07-26
Published on: PLOS Biology
summary: An important hallmark of science is the transparency and reproducibility of scientific results. Over the last few years, internet-based technologies have emerged that allow for a representation of the scientific process that goes far beyond traditional methods and analysis descriptions.
Publishing date: 2018-07-26
Published on: PLOS Computational Biology
summary: Movement is fundamental to human and animal life, emerging through interaction of complex neural, muscular, and skeletal systems. Study of movement draws from and contributes to diverse fields, including biology, neuroscience, mechanics, and robotics.
Publishing date: 2018-07-26
Published on: PLOS Computational Biology
summary: Integrated information theory provides a mathematical framework to fully characterize the cause-effect structure of a physical system. Here, the authors introduce PyPhi, a Python software package that implements this framework for causal analysis and unfolds the full cause-effect structure of discrete dynamical systems of binary elements.
Publishing date: 2018-07-25
Published on: PLOS ONE
summary: The potentiostat presented here from Prattana Lopin and Kyle V. Lopin can measure the presence of chemicals including vitamin C and lead without any external electronic components.
Publishing date: 2018-07-17
Published on: PLOS ONE
summary: None
authors: None
link to paper: http://dx.doi.org/10.1371/journal.pone.0199771
Icons made by catkuro from www.flaticon.com
Publishing date: 2018-07-11
Published on: PLOS ONE
summary: The accurate quantification of cellular and mitochondrial bioenergetic activity is of great interest in medicine and biology. This study provides statistical good practices to support experimentalists in designing, analyzing, testing, and reporting the results of mitochondrial stress tests using this high throughput platform.
Publishing date: 2018-07-03
Published on: PLOS Biology
summary: CellProfiler is a free software that has enabled researchers, without training in computer vision or programming community to create flexible, modular image analysis pipelines since its release in 2005.