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publications
Impaired c-Fos and Polo-Like Kinase 2 Induction in the Limbic System of Fear-conditioned α-Synuclein Transgenic Mice
Published in PLOS ONE, 2012
Recommended citation: Heinrich Schell, Cindy Boden, André Chagas, Philipp Kahle, "Impaired c-Fos and Polo-Like Kinase 2 Induction in the Limbic System of Fear-conditioned α-Synuclein Transgenic Mice." PLOS ONE, 2012.
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Functional analysis of ultra high information rates conveyed by rat vibrissal primary afferents
Published in Frontiers in Neural Circuits, 2013
Recommended citation: André Maia, Lucas Theis, Biswa Sengupta, Maik Stüttgen, Matthias Bethge, Cornelius Schwarz, "Functional analysis of ultra high information rates conveyed by rat vibrissal primary afferents." Frontiers in Neural Circuits, 2013.
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Beyond GLMs: A Generative Mixture Modeling Approach to Neural System Identification
Published in PLOS Computational Biology, 2013
Recommended citation: Lucas Theis, Andrè Chagas, Daniel Arnstein, Cornelius Schwarz, Matthias Bethge, "Beyond GLMs: A Generative Mixture Modeling Approach to Neural System Identification." PLOS Computational Biology, 2013.
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Open Labware: 3-D Printing Your Own Lab Equipment
Published in PLOS Biology, 2015
Recommended citation: Tom Baden, Andre Chagas, Greg Gage, Timothy Marzullo, Lucia Prieto-Godino, Thomas Euler, "Open Labware: 3-D Printing Your Own Lab Equipment." PLOS Biology, 2015.
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The 100 Euro Lab: A 3-D Printable Open Source Platform For Fluorescence Microscopy, Optogenetics And Accurate Temperature Control During Behaviour Of Zebrafish, Drosophila And C. elegans
Published in bioRxiv, 2017
Recommended citation: Andre Maia, Lucia Prieto, Aristides Arrenberg, Tom Baden, "The 100 Euro Lab: A 3-D Printable Open Source Platform For Fluorescence Microscopy, Optogenetics And Accurate Temperature Control During Behaviour Of Zebrafish, Drosophila And C. elegans." bioRxiv, 2017.
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The €100 lab: A 3D-printable open-source platform for fluorescence microscopy, optogenetics, and accurate temperature control during behaviour of zebrafish, Drosophila, and Caenorhabditis elegans
Published in PLOS Biology, 2017
Recommended citation: Andre Chagas, Lucia Prieto-Godino, Aristides Arrenberg, Tom Baden, "The €100 lab: A 3D-printable open-source platform for fluorescence microscopy, optogenetics, and accurate temperature control during behaviour of zebrafish, Drosophila, and Caenorhabditis elegans." PLOS Biology, 2017.
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Implementation of a Novel Educational Course to Teach 3D Printing, Circuit Design, and Programming to PhD Candidates in Nigeria
Published in SocArXiv, 2017
Recommended citation: Austin Quinn, Benjamin Paffhausen, Andre Chagas, "Implementation of a Novel Educational Course to Teach 3D Printing, Circuit Design, and Programming to PhD Candidates in Nigeria." SocArXiv, 2017.
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Building and hacking open source hardware
Published in Research Ideas and Outcomes, 2018
Recommended citation: Simone Monachino, Eric McDermott, Andre Chagas, "Building and hacking open source hardware." Research Ideas and Outcomes, 2018.
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An arbitrary-spectrum spatial visual stimulator for vision research
Published in bioRxiv, 2019
Recommended citation: Katrin Franke, André Chagas, Zhijian Zhao, Maxime Zimmermann, Yongrong Qiu, Klaudia Szatko, Tom Baden, Thomas Euler, "An arbitrary-spectrum spatial visual stimulator for vision research." bioRxiv, 2019.
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An arbitrary-spectrum spatial visual stimulator for vision research
Published in eLife, 2019
Recommended citation: Katrin Franke, André Maia, Zhijian Zhao, Maxime Zimmermann, Philipp Bartel, Yongrong Qiu, Klaudia Szatko, Tom Baden, Thomas Euler, "An arbitrary-spectrum spatial visual stimulator for vision research." eLife, 2019.
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The temporal structure of the inner retina at a single glance
Published in bioRxiv, 2019
Recommended citation: Zhijian Zhao, David Klindt, André Chagas, Klaudia Szatko, Luke Rogerson, Dario Protti, Christian Behrens, Deniz Dalkara, Timm Schubert, Matthias Bethge, Katrin Franke, Philipp Berens, Alexander Ecker, Thomas Euler, "The temporal structure of the inner retina at a single glance." bioRxiv, 2019.
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LED Zappelin′: An open source LED controller for arbitrary spectrum visual stimulation and optogenetics during 2-photon imaging.
Published in bioRxiv, 2020
Publisher: Cold Spring Harbor Laboratory Section: New Results
Recommended citation: Maxime Zimmermann, Andre Chagas, Philipp Bartel, Sinziana Pop, Lucia Prieto-Godino, Tom Baden, "LED Zappelin′: An open source LED controller for arbitrary spectrum visual stimulation and optogenetics during 2-photon imaging.." bioRxiv, 2020.
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The temporal structure of the inner retina at a single glance
Published in Scientific Reports, 2020
Recommended citation: Zhijian Zhao, David Klindt, André Chagas, Klaudia Szatko, Luke Rogerson, Dario Protti, Christian Behrens, Deniz Dalkara, Timm Schubert, Matthias Bethge, Katrin Franke, Philipp Berens, Alexander Ecker, Thomas Euler, "The temporal structure of the inner retina at a single glance." Scientific Reports, 2020.
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TReND in Africa: Toward a Truly Global (Neuro)science Community
Published in Neuron, 2020
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Recommended citation: Tom Baden, Mahmoud Maina, Andre Maia, Yunusa Mohammed, Thomas Auer, Ana Silbering, Lukas Tobel, Marie Pertin, Renee Hartig, Jelena Aleksic, Ibukun Akinrinade, Mosab Awadelkareem, Artemis Koumoundourou, Aled Jones, Fabiana Arieti, Andrew Beale, Daniel Münch, Samyra Salek, Sadiq Yusuf, Lucia Prieto-Godino, "TReND in Africa: Toward a Truly Global (Neuro)science Community." Neuron, 2020.
PiSpy: An Affordable, Accessible, and Flexible Imaging Platform for the Automated Observation of Organismal Biology and Behavior
Published in bioRxiv, 2022
Section: New Results Type: article
Recommended citation: Benjamin Morris, Marcy Kittredge, Bea Casey, Owen Meng, André Chagas, Matt Lamparter, Thomas Thul, Gregory Pask, "PiSpy: An Affordable, Accessible, and Flexible Imaging Platform for the Automated Observation of Organismal Biology and Behavior." bioRxiv, 2022.
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Bypassing shortages of personal protective equipment in low-income settings using local production and open source tools
Published in PLOS Biology, 2022
Publisher: Public Library of Science
Recommended citation: Royhaan Folarin, Mahmoud Maina, Abisola Akinbo, Tamramat Runsewe-Abiodun, Omobola Ogundahunsi, Ahmed Adedeji, Andre Chagas, "Bypassing shortages of personal protective equipment in low-income settings using local production and open source tools." PLOS Biology, 2022.
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PiSpy: An affordable, accessible, and flexible imaging platform for the automated observation of organismal biology and behavior
Published in PLOS ONE, 2022
Recommended citation: Benjamin Morris, Marcy Kittredge, Bea Casey, Owen Meng, André Chagas, Matt Lamparter, Thomas Thul, Gregory Pask, "PiSpy: An affordable, accessible, and flexible imaging platform for the automated observation of organismal biology and behavior." PLOS ONE, 2022.
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Using Open Neuroscience to Advance Equity in the Pedagogy and Research Infrastructure in Colleges/Universities Still Financially Impacted by COVID-19: The Emergence of a Global Resource Network Aimed at Integrating Neuroscience and Society
Published in Journal of undergraduate neuroscience education: JUNE: a publication of FUN, Faculty for Undergraduate Neuroscience, 2023
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Recommended citation: Andre Chagas, Turhan Canli, Donya Ziadlou, Paul Forlano, Sreyashi Samaddar, Elizabeth Chua, Karen Baskerville, Kinning Poon, Lorenz Neuwirth, "Using Open Neuroscience to Advance Equity in the Pedagogy and Research Infrastructure in Colleges/Universities Still Financially Impacted by COVID-19: The Emergence of a Global Resource Network Aimed at Integrating Neuroscience and Society." Journal of undergraduate neuroscience education: JUNE: a publication of FUN, Faculty for Undergraduate Neuroscience, 2023.
Development and implementation of a significantly low-cost 3D bioprinter using recycled scrap material
Published in Frontiers in Bioengineering and Biotechnology, 2023
Recommended citation: Jaciara Gomes, Evellyn Dias, Rosângela Aguiar, André Chagas, José Aguiar, Luiz Alves, "Development and implementation of a significantly low-cost 3D bioprinter using recycled scrap material." Frontiers in Bioengineering and Biotechnology, 2023.
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Setting up a state‐of‐the‐art laboratory in resource limited settings: A case study of the biomedical science research and training centre in Northeast Nigeria
Published in European Journal of Neuroscience, 2024
Recommended citation: Murtala Isah, Zaid Muhammad, Mohammed Lawan, Abdulrahman Alkhamis, Baba Goni, Sebastian Oakley, Karen Marshall, Renée Hartig, Issa Raouf, Takeshi Yoshimatsu, André Chagas, Mahmoud Maina, "Setting up a state‐of‐the‐art laboratory in resource limited settings: A case study of the biomedical science research and training centre in Northeast Nigeria." European Journal of Neuroscience, 2024.
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